DeepSeqPan

This the corresponding repository of paper DeepSeqPan, a novel deep convolutional neural network model for pan-specific class I HLA-peptide binding affinity prediction.

To cite

@article{liu2019deepseqpan,
  title={DeepSeqPan, a novel deep convolutional neural network model for pan-specific class I HLA-peptide binding affinity prediction},
  author={Liu, Zhonghao and Cui, Yuxin and Xiong, Zheng and Nasiri, Alierza and Zhang, Ansi and Hu, Jianjun},
  journal={Scientific Reports},
  volume={9},
  number={1},
  pages={794},
  year={2019},
  publisher={Nature Publishing Group}
}

Structure

• dataset: All training and evaluation dataset.
• models: Trained models.
• scripts: Code to run