kallistobustools

kallisto | bustools workflow for pre-processing single-cell RNA-seq data

Please visit https://kallistobus.tools for tutorials on how to process single-cell RNA-seq data.

Contributing

Create a Google Colab notebook and make a pull request. If approved your_tutorial.ipynb will be added to a new folder tutorials/docs/tutorials/your_tutorial_folder/{python,R}.

You will also need to make a pull request to add a reference to your tutorial in the mkdocs.yml file. For example:

- Tutorials: 
  - Your Tutorial Name:
    - Python: tutorials/your_tutorial_folder/{python,R}/your_tutorial.md

Note: tutorials will either be in python or R, so paths should be written as tutorials/your_tutorial_folder/R/your_tutorial.md for example.