ScDVA

scDNA

An R shiny based tool used for single cell RNA-seq data visualization and analysis.

Tutorial

For more details and basic usage see following tutorials:
User manual for scDVA

Example

A running demo of scDVA is on scDVA

Contact

Please contact us:
Ziyi Li: liziyie@pku.edu.cn
Zemin Zhang: zemin@pku.edu.cn

Brief introduction

After you run the app.R, the page will look like this:

You can explore the gene expression and metadata information with tSNE(UMAP) plot, box plot, violin plot, bar plot or heatmap. You can also do in-silico FACS and calculate the differentially expressed genes in different groups.

Copyright

©2019 Ziyi Li. Zhang Lab. All rights reserved.