salmon-rna-quantification
Ultra-fast RNA-seq transcript/gene quantification via quasi-mapping (no BAM). Builds a k-mer index from transcriptome FASTA, quantifies in minutes. Outputs TPM/count tables (quant.sf) with optional GC- and sequence-bias correction. Integrates with tximeta/tximport for DESeq2/edgeR.
Install / Use
npx skills add jaechang-hits/SciAgent-Skills --skill salmon-rna-quantificationInstalls into whichever agent you are using.
SKILL.md
Installable skill definition
Quality Score
Category
MarketingSupported Platforms
Tags
Our assessment of salmon-rna-quantification
salmon-rna-quantification scores 83/100 on our quality scale, 479th of 606 Marketing skills we index.
We have not analysed the SKILL.md file itself yet, so the content part of this score is an estimate until our crawler reaches it.
It has 367 GitHub stars, a meaningful sign that others use it.
Maintenance, license and trust
- The repository was last updated 37 days ago, so salmon-rna-quantification is actively maintained.
- No license is declared. By default that means all rights are reserved: you can read it, but reusing or redistributing it is not clearly permitted. Ask the author before building on it commercially.
- Its trust signals score 88/100, with 1 caution from licensing, adoption, age or documentation. These come from repository metadata, not a code audit — read the skill file before letting an agent act on it.
salmon-rna-quantification compared with similar skills
All 4 of these similar skills score higher than salmon-rna-quantification; compare them before choosing.
| Skill | Score | Stars | Updated | Format |
|---|---|---|---|---|
| salmon-rna-quantification (this skill)by jaechang-hits | 83 | 367 | 37d ago | SKILL.md |
| algorithmic-artby anthropics | 100 | 177.9k | 12d ago | SKILL.md |
| pptxby anthropics | 100 | 177.9k | 12d ago | SKILL.md |
| designby nextlevelbuilder | 100 | 130.2k | 13d ago | SKILL.md |
| ui-ux-pro-maxby nextlevelbuilder | 100 | 130.2k | 13d ago | SKILL.md |
Frequently asked questions
- How do I install salmon-rna-quantification?
- Run
npx skills add jaechang-hits/SciAgent-Skills --skill salmon-rna-quantification. The install tabs above show the steps for each supported agent. - Which AI agents does salmon-rna-quantification work with?
- It is written for Universal, as a SKILL.md file. Other agents that read the same format can often use it too.
- Is salmon-rna-quantification safe to use?
- It declares no license and scores 88/100 on trust signals. Skills are instructions an agent will follow, so read the file before installing it and do not approve commands you do not understand.
- Is salmon-rna-quantification still maintained?
- The repository was last updated 37 days ago, so salmon-rna-quantification is actively maintained.
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Languages
Trust signals
From repository metadata: license, adoption, age and documentation. Not a code audit — see the Safety scan above for what the skill file itself contains.