muon-multiomics-singlecell
Multi-modal single-cell analysis with muon/MuData. Joint RNA+ATAC (10x Multiome), CITE-seq (RNA+protein), other multi-omics. MuData holds per-modality AnnData with shared obs. WNN joint embedding, per-modality preprocessing, MOFA factor analysis.
Install / Use
npx skills add jaechang-hits/SciAgent-Skills --skill muon-multiomics-singlecellInstalls into whichever agent you are using.
SKILL.md
Installable skill definition
Quality Score
Category
AI & Machine LearningSupported Platforms
Our assessment of muon-multiomics-singlecell
muon-multiomics-singlecell scores 83/100 on our quality scale, 676th of 964 AI & Machine Learning skills we index.
We have not analysed the SKILL.md file itself yet, so the content part of this score is an estimate until our crawler reaches it.
It has 367 GitHub stars, a meaningful sign that others use it.
Maintenance, license and trust
- The repository was last updated 37 days ago, so muon-multiomics-singlecell is actively maintained.
- No license is declared. By default that means all rights are reserved: you can read it, but reusing or redistributing it is not clearly permitted. Ask the author before building on it commercially.
- Its trust signals score 88/100, with 1 caution from licensing, adoption, age or documentation. These come from repository metadata, not a code audit — read the skill file before letting an agent act on it.
muon-multiomics-singlecell compared with similar skills
All 4 of these similar skills score higher than muon-multiomics-singlecell; compare them before choosing.
| Skill | Score | Stars | Updated | Format |
|---|---|---|---|---|
| muon-multiomics-singlecell (this skill)by jaechang-hits | 83 | 367 | 37d ago | SKILL.md |
| claude-memby thedotmack | 100 | 96.3k | today | CLAUDE.md |
| Agent-Reachby Panniantong | 100 | 91.2k | 19d ago | CLAUDE.md |
| Understand-Anythingby Egonex-AI | 100 | 85.3k | 3d ago | CLAUDE.md |
| headroomby headroomlabs-ai | 100 | 74.4k | today | CLAUDE.md |
Frequently asked questions
- How do I install muon-multiomics-singlecell?
- Run
npx skills add jaechang-hits/SciAgent-Skills --skill muon-multiomics-singlecell. The install tabs above show the steps for each supported agent. - Which AI agents does muon-multiomics-singlecell work with?
- It is written for Universal, as a SKILL.md file. Other agents that read the same format can often use it too.
- Is muon-multiomics-singlecell safe to use?
- It declares no license and scores 88/100 on trust signals. Skills are instructions an agent will follow, so read the file before installing it and do not approve commands you do not understand.
- Is muon-multiomics-singlecell still maintained?
- The repository was last updated 37 days ago, so muon-multiomics-singlecell is actively maintained.
Related Skills
claude-mem
96.3kPersistent Context Across Sessions for Every Agent – Captures everything your agent does during sessions, compresses it with AI, and injects relevant context back into future sessions. Works with Claude Code, OpenClaw, Codex, Gemini, Hermes, Copilot, OpenCode + More
Agent-Reach
91.2kGive your AI agent eyes to see the entire internet. Read & search Twitter, Reddit, YouTube, GitHub, Bilibili, XiaoHongShu — one CLI, zero API fees.
Understand-Anything
85.3kGraphs that teach > graphs that impress. Turn any code into an interactive knowledge graph you can explore, search, and ask questions about. Works with Claude Code, Codex, Cursor, Copilot, Gemini CLI, and more.
headroom
74.4kCompress tool outputs, logs, files, and RAG chunks before they reach the LLM. 20% fewer tokens for coding agents, 60-95% fewer tokens for JSON, same answers. Library, proxy, MCP server.
Languages
Trust signals
From repository metadata: license, adoption, age and documentation. Not a code audit — see the Safety scan above for what the skill file itself contains.