Bisplotti

<img id="bisplotti_logo" src="man/figures/bisplotti_bg.png" align="left" width="300"/><br /> <br />  

bisplotti

bisplotti is a part of the greater suite of tools (BISCUIT, biscuiteer, and SeSAMe) used for both whole-genome methylation sequencing (WGMS) and methylation array data. Specifically, bisplotti is a package dedicated to producing commonly utilized exploratory data analysis and plotting.

Install from Github

## using BiocManager from CRAN
install.packages("BiocManager")
BiocManager::install("huishenlab/bisplotti")

Some rudimentary plotting ideas. Not all of these are fully implemented yet.

Multi-scale plots of solo-WCGWs

<p align="center"> <img id="multiscale_plot" src="man/figures/example_multiscale_plot_chr16_tcell_new_old.png"/> </p>

Epiread and epiallele

<p align="center"> <img id="epiread_plot" src="man/figures/epistate_test_plot.png"/> </p>