protein-sequence-similarity-search
Searches for homologous protein sequences using MMseqs2 (fast, default) or BLAST (comprehensive, fallback). Trigger this whenever the user provides a protein sequence or FASTA file and asks to find homologues, sequence matches, or wants to infer protein function based on sequence similarity, but not…
Install / Use
npx skills add google-deepmind/science-skills --skill protein_sequence_similarity_searchInstalls into whichever agent you are using.
SKILL.md
Installable skill definition
Quality Score
Category
Development & EngineeringSupported Platforms
Tags
Our assessment of protein-sequence-similarity-search
protein-sequence-similarity-search scores 86/100 on our quality scale, 1269th of 3,045 Development & Engineering skills we index (top 42%).
We have not analysed the SKILL.md file itself yet, so the content part of this score is an estimate until our crawler reaches it.
With 3,137 GitHub stars, it is one of the more widely adopted skills in the catalogue.
Maintenance, license and trust
- The repository was last updated 12 days ago, so protein-sequence-similarity-search is actively maintained.
- It is released under the Apache-2.0 license, a permissive license that allows use, modification and commercial use with attribution.
- Its trust signals score 100/100, with no cautions. These come from repository metadata, not a code audit — read the skill file before letting an agent act on it.
protein-sequence-similarity-search compared with similar skills
All 4 of these similar skills score higher than protein-sequence-similarity-search; compare them before choosing.
| Skill | Score | Stars | Updated | Format |
|---|---|---|---|---|
| protein-sequence-similarity-search (this skill)by google-deepmind | 86 | 3.1k | 12d ago | SKILL.md |
| ai-job-searchby MadsLorentzen | 100 | 44.3k | today | CLAUDE.md |
| claude-howtoby luongnv89 | 100 | 41.7k | 2d ago | CLAUDE.md |
| algorithmic-artby anthropics | 100 | 177.9k | 5d ago | SKILL.md |
| pptxby anthropics | 100 | 177.9k | 5d ago | SKILL.md |
Frequently asked questions
- How do I install protein-sequence-similarity-search?
- Run
npx skills add google-deepmind/science-skills --skill protein-sequence-similarity-search. The install tabs above show the steps for each supported agent. - Which AI agents does protein-sequence-similarity-search work with?
- It is written for Universal, as a SKILL.md file. Other agents that read the same format can often use it too.
- Is protein-sequence-similarity-search safe to use?
- It is Apache-2.0-licensed and scores 100/100 on trust signals. Skills are instructions an agent will follow, so read the file before installing it and do not approve commands you do not understand.
- Is protein-sequence-similarity-search still maintained?
- The repository was last updated 12 days ago, so protein-sequence-similarity-search is actively maintained.
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Languages
Trust signals
From repository metadata: license, adoption, age and documentation. Not a code audit — see the Safety scan above for what the skill file itself contains.