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EasyDockVina

EasyDockVina is a free tool to perform for receptor with multiple (batch) ligand docking with AutoDockVina.

Install / Use

/learn @futureomics/EasyDockVina
About this skill

Quality Score

0/100

Supported Platforms

Universal

README

EasyDockVina

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Future Omics Bioinformatics made easy https://youtu.be/pmXxPVcud54?si=XY9It5HSql8XS7h6

    EasyDockVina dock [parameters]

    --receptor file.pdbqt                   Receptor should be prepared and in pdbqt format.
    --ligands ./ligands/                    Ligands folder, all ligands should be in pdbqt format.
    --config config.txt                     Config file should only contain search box center and size.
    --output docking_result.txt             All docking results will be written on the file specified.

[+] Example:

    EasyDockVina dock --receptor 1mq4.pdbqt --ligands ./ligands/ --config config.txt --output results.txt
    

this tool will only work on windows machines, linux version is on the way.<br/>

modelling-fu-7

Related Skills

View on GitHub
GitHub Stars13
CategoryDevelopment
Updated9mo ago
Forks2

Security Score

67/100

Audited on Jun 25, 2025

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