pydeseq2
Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.
Install / Use
npx skills add foryourhealth111-pixel/Vibe-Skills --skill pydeseq2Installs into whichever agent you are using.
SKILL.md
Installable skill definition
Quality Score
Category
AutomationSupported Platforms
Our assessment of pydeseq2
pydeseq2 scores 86/100 on our quality scale, 1070th of 1,943 Automation skills we index.
We have not analysed the SKILL.md file itself yet, so the content part of this score is an estimate until our crawler reaches it.
With 3,433 GitHub stars, it is one of the more widely adopted skills in the catalogue.
Maintenance, license and trust
- The repository was last updated 27 days ago, so pydeseq2 is actively maintained.
- It is released under the Apache-2.0 license, a permissive license that allows use, modification and commercial use with attribution.
- Its trust signals score 100/100, with no cautions. These come from repository metadata, not a code audit — read the skill file before letting an agent act on it.
pydeseq2 compared with similar skills
All 4 of these similar skills score higher than pydeseq2; compare them before choosing.
| Skill | Score | Stars | Updated | Format |
|---|---|---|---|---|
| pydeseq2 (this skill)by foryourhealth111-pixel | 86 | 3.4k | 27d ago | SKILL.md |
| Agent-Reachby Panniantong | 100 | 85.7k | 12d ago | CLAUDE.md |
| headroomby headroomlabs-ai | 100 | 73.9k | today | CLAUDE.md |
| rufloby ruvnet | 100 | 73.4k | today | CLAUDE.md |
| crawl4aiby unclecode | 100 | 84.4k | 2d ago | MCP Server |
Frequently asked questions
- How do I install pydeseq2?
- Run
npx skills add foryourhealth111-pixel/Vibe-Skills --skill pydeseq2. The install tabs above show the steps for each supported agent. - Which AI agents does pydeseq2 work with?
- It is written for Universal, as a SKILL.md file. Other agents that read the same format can often use it too.
- Is pydeseq2 safe to use?
- It is Apache-2.0-licensed and scores 100/100 on trust signals. Skills are instructions an agent will follow, so read the file before installing it and do not approve commands you do not understand.
- Is pydeseq2 still maintained?
- The repository was last updated 27 days ago, so pydeseq2 is actively maintained.
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Languages
Trust signals
From repository metadata: license, adoption, age and documentation. Not a code audit — see the Safety scan above for what the skill file itself contains.