SkillAgentSearch skills...

Assemble

a tool for creating Molecular Dynamics-ready models of polymeric systems

Install / Use

/learn @degiacom/Assemble
About this skill

Quality Score

0/100

Supported Platforms

Universal

README

Assemble!

Assemble! is a tool aimed at generating atomistic polymeric mixtures ready for simulation in Gromacs. It is developed by Dr Matteo Degiacomi and Dr Valentina Erastova. Source code is distributed along with tutorial and user manual.

Requirements

Executing Assemble! from source requires Python 2.7 or >3.0, as well as numpy and wxpython >=4.0 packages.

Reference

When using Assemble! in your work, please cite the following publication: M. T. Degiacomi, V. Erastova, M. R. Wilson, Easy setup of molecular dynamics simulations of polymeric mixtures with Assemble!, Computer Physics Communications, Volume 202, 304-309, 2016

Contact

For any questions, please contact matteo.degiacomi@gmail.com or valentina.erastova@gmail.com

View on GitHub
GitHub Stars23
CategoryDevelopment
Updated5mo ago
Forks7

Languages

Python

Security Score

87/100

Audited on Nov 3, 2025

No findings