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PlantCV: Plant phenotyping using computer vision
Please use, cite, and contribute to PlantCV!
If you have questions, please submit them via the
GitHub issues page.
Follow us on twitter @plantcv.
Introduction to PlantCV
PlantCV is an open-source image analysis software package targeted for plant phenotyping. PlantCV provides a common
programming and documentation interface to a collection of image analysis techniques that are integrated from a variety
of source packages and algorithms. PlantCV utilizes a modular architecture that enables flexibility in the design of
analysis workflows and rapid assimilation and integration of new methods. For more information about the project,
links to recorded presentations, and publications using PlantCV, please visit our homepage:
https://plantcv.danforthcenter.org/.
Quick Links
Citing PlantCV
If you use PlantCV, please cite the PlantCV publications
relevant to your work. To see how others have used PlantCV in their research, check out our list of
publications using PlantCV.
Issues with PlantCV
Please file any PlantCV suggestions/issues/bugs via our
GitHub issues page. Please check to see if any related
issues have already been filed.
Contributors
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<td align="center" valign="top" width="14.28%"><a href="https://github.com/AFis-245"><img src="https://avatars.githubusercontent.com/u/145135602?v=4?s=100" width="100px;" alt="AFis-245"/><br /><sub><b>AFis-245</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=AFis-245" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://www.adonline.id.au/"><img src="https://avatars.githubusercontent.com/u/5926320?v=4?s=100" width="100px;" alt="Adam Dimech"/><br /><sub><b>Adam Dimech</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=AdamDimech" title="Code">💻</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=AdamDimech" title="Documentation">📖</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=AdamDimech" title="Tests">⚠️</a> <a href="#ideas-AdamDimech" title="Ideas, Planning, & Feedback">🤔</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://alexanderkutschera.com/"><img src="https://avatars.githubusercontent.com/u/20026476?v=4?s=100" width="100px;" alt="Alexander Kutschera"/><br /><sub><b>Alexander Kutschera</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=vektorious" title="Code">💻</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=vektorious" title="Documentation">📖</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=vektorious" title="Tests">⚠️</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/aapokor"><img src="https://avatars.githubusercontent.com/u/39534960?v=4?s=100" width="100px;" alt="Alexandria Pokorny"/><br /><sub><b>Alexandria Pokorny</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=aapokor" title="Code">💻</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=aapokor" title="Documentation">📖</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=aapokor" title="Tests">⚠️</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/AzlinII"><img src="https://avatars.githubusercontent.com/u/15007726?v=4?s=100" width="100px;" alt="Andy Lin"/><br /><sub><b>Andy Lin</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=AzlinII" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/caitlynelliott56"><img src="https://avatars.githubusercontent.com/u/214695433?v=4?s=100" width="100px;" alt="Caitlyn Elliott"/><br /><sub><b>Caitlyn Elliott</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=caitlynelliott56" title="Code">💻</a> <a href="#ideas-caitlynelliott56" title="Ideas, Planning, & Feedback">🤔</a> <a href="#tutorial-caitlynelliott56" title="Tutorials">✅</a></td>
<td align="center" valign="top" width="14.28%"><a href="http://calizarr.github.io/resume"><img src="https://avatars.githubusercontent.com/u/3262069?v=4?s=100" width="100px;" alt="Cesar Lizarraga"/><br /><sub><b>Cesar Lizarraga</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=calizarr" title="Code">💻</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=calizarr" title="Documentation">📖</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=calizarr" title="Tests">⚠️</a></td>
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<td align="center" valign="top" width="14.28%"><a href="https://github.com/clhendrikse"><img src="https://avatars.githubusercontent.com/u/70405404?v=4?s=100" width="100px;" alt="Chloe Hendrikse"/><br /><sub><b>Chloe Hendrikse</b></sub></a><br /><a href="#tutorial-clhendrikse" title="Tutorials">✅</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=clhendrikse" title="Documentation">📖</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/cluebbert"><img src="https://avatars.githubusercontent.com/u/47461392?v=4?s=100" width="100px;" alt="Collin Luebbert"/><br /><sub><b>Collin Luebbert</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=cluebbert" title="Code">💻</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://www.linkedin.com/in/david-peery-344882126/"><img src="https://avatars.githubusercontent.com/u/63679152?v=4?s=100" width="100px;" alt="David Peery"/><br /><sub><b>David Peery</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=jdavidpeery" title="Code">💻</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=jdavidpeery" title="Documentation">📖</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=jdavidpeery" title="Tests">⚠️</a> <a href="#ideas-jdavidpeery" title="Ideas, Planning, & Feedback">🤔</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://github.com/dhiraj-ms"><img src="https://avatars.githubusercontent.com/u/39856917?v=4?s=100" width="100px;" alt="Dhiraj Srivastava"/><br /><sub><b>Dhiraj Srivastava</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=dhiraj-ms" title="Code">💻</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=dhiraj-ms" title="Documentation">📖</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=dhiraj-ms" title="Tests">⚠️</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://data-folks.masto.host/@dschneiderch"><img src="https://avatars.githubusercontent.com/u/7461221?v=4?s=100" width="100px;" alt="Dominik Schneider"/><br /><sub><b>Dominik Schneider</b></sub></a><br /><a href="https://github.com/danforthcenter/plantcv/commits?author=dschneiderch" title="Code">💻</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=dschneiderch" title="Documentation">📖</a> <a href="https://github.com/danforthcenter/plantcv/commits?author=dschneiderch" title="Tests">⚠️</a> <a href="#ideas-dschneiderch" title="Ideas, Planning, & Feedback">🤔</a></td>
<td align="center" valign="top" width="14.28%"><a href="https://rayngrowingsystems.com/"><img src="https://avatars
