SPIAT
Spatial Image Analysis of Tissues
Install / Use
/learn @cancer-evolution/SPIATREADME
SPIAT
Spatial Image Analysis of Tissues
R package for the analysis of OPAL multiplex immunohistochemistry images.
UPDATE December 2022: THIS REPO IS NOW DEPRECATED For the latest version of SPIAT, please visit: https://github.com/TrigosTeam/SPIAT. SPIAT is also available on Bioconductor: https://bioconductor.org/packages/release/bioc/html/SPIAT.html
Authors:
Yuzhou Feng, Tianpei Yang, Volkan Ozcoban, Anu Pasam, Nikolce Kocovski, Angela Pizzolla, Yu-Kuan Huang, Greg Bass, Simon P. Keam, Paul J. Neeson, Shahneen K. Sandhu, David L. Goode, Anna S. Trigos
Pre-print available: SPIAT: An R package for the Spatial Image Analysis of Cells in Tissues https://www.biorxiv.org/content/10.1101/2020.05.28.122614v1
Related Skills
node-connect
341.0kDiagnose OpenClaw node connection and pairing failures for Android, iOS, and macOS companion apps
frontend-design
84.4kCreate distinctive, production-grade frontend interfaces with high design quality. Use this skill when the user asks to build web components, pages, or applications. Generates creative, polished code that avoids generic AI aesthetics.
openai-whisper-api
341.0kTranscribe audio via OpenAI Audio Transcriptions API (Whisper).
commit-push-pr
84.4kCommit, push, and open a PR
