Proatac
Preprocessing pipeline for (sc)ATAC data
Install / Use
/learn @caleblareau/ProatacREADME
This package is maintained by Caleb Lareau in the Buenrostro Lab. Source code is made freely available and a packaged install version is provided through PyPi. <br><br>
About
The proatac package implements our data processing and quality control pipeline bulk ATAC-Seq, single cell ATAC-Seq, and droplet-based ATAC-Seq data. <br><br>
Workflow Overview
A detailed description of the workflow including a description of various parameter settings is discussed in depth in the proatac documentation. Below is a brief overview of
<br><br>
Installation/Documentation/FAQ/.etc
Check out the proatac documentation for detailed installation instructions, dependency configuration, and other <br><br>
Questions/comments/feedback
are always welcomed. The easiest way for us to have correspondence (if appropriate/interesting for the public) is through raising a new issue on the GitHub source. For private concerns, email Caleb. <br><br> proatac logo made freely with logomakr these blue and red color definitions. <br><br><br>
Related Skills
node-connect
348.5kDiagnose OpenClaw node connection and pairing failures for Android, iOS, and macOS companion apps
frontend-design
109.1kCreate distinctive, production-grade frontend interfaces with high design quality. Use this skill when the user asks to build web components, pages, or applications. Generates creative, polished code that avoids generic AI aesthetics.
openai-whisper-api
348.5kTranscribe audio via OpenAI Audio Transcriptions API (Whisper).
qqbot-media
348.5kQQBot 富媒体收发能力。使用 <qqmedia> 标签,系统根据文件扩展名自动识别类型(图片/语音/视频/文件)。
