PLANiTS

PLANiTS: a curated sequence reference dataset for plant ITS DNA metabarcoding

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/learn @apallavicini/PLANiTS

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README

PLANiTS

The ITS, ITS1 and ITS2 reference dataset for subkingdom Viridiplantae

How to cite

If you find this reference dataset useful and you are going to use it in a publication, please cite:
Banchi, E.; Ametrano, C.G.; Greco, S.; Stanković, D.; Muggia, L.; Pallavicini, A. PLANiTS: a curated sequence reference dataset for plant ITS DNA metabarcoding. Database 2020, 2020.

Repository content

"PLANiTS_29-03-2020.zip" contains the three databases in QIIME format and SINTAX format.

"qiime_classifiers" contains ITS, ITS1 and ITS2 classifiers in qza format for qiime taxonomic analyses

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