Cylouvain
Python module providing a Cython implementation of the classic Louvain algorithm for graph clustering
Install / Use
/learn @ahollocou/CylouvainREADME
cylouvain: Cython Louvain
cylouvain is a Python module that provides a fast implementation of the classic Louvain algorithm for node clustering in graph.
This module uses Cython in order to obtain C-like performance with code mostly writen in Python.
Installation
Install the latest version of cylouvain using pip ::
$ pip install cylouvain
Dependencies
cylouvain requires:
- Python (>= 2.7 or >= 3.4)
- NumPy
- SciPy
- NetworkX
Simple example
Build a simple graph with NetworkX::
>>> import networkx as nx
>>> graph = nx.Graph()
>>> graph.add_nodes_from(['a', 'b', 'c', 'd', 'e'])
>>> graph.add_edges_from([('a', 'b'), ('a', 'c'), ('b', 'c'),
('c', 'd'), ('c', 'e'), ('d', 'e')])
Compute a partition of the nodes using cylouvain::
>>> import cylouvain
>>> partition = cylouvain.best_partition(graph)
>>> print(partition)
{'a': 0, 'b': 0, 'c': 0, 'd': 1, 'e': 1}
Compute the corresponding modularity::
>>> modularity = cylouvain.modularity(partition, graph)
>>> print("Modularity: %0.3f\n" % modularity)
Modularity: 0.111
References
The Louvain algorithm is an heuristic to find a node partition that maximizes the modularity function. It is described in::
Fast unfolding of communities in large networks
Vincent D Blondel, Jean-Loup Guillaume, Renaud Lambiotte, Etienne Lefebvre
Journal of Statistical Mechanics: Theory and Experiment 2008 (10), P10008 (12pp)
The modularity function was first introduced in::
Finding and evaluating community structure in networks
Newman, Mark EJ and Girvan, Michelle
Physical review E, 2004, vol. 69, no 2, p. 026113.
License
Released under the 3-Clause BSD license (see COPYING)::
Copyright (C) 2018 Alexandre Hollocou alexandre@hollocou.fr
