ShinyLimma
Extends Limma into a web-app GUI that allows non-programmers to utilize differential expression analysis in their research.
Install / Use
/learn @SJCaldwell/ShinyLimmaREADME
ShinyLimma
shinyLimma is a web application providing a graphical user interface to the differential expression analysis package for R, limma. For details, you can see the [limma user guide][limma]. [limma]: http://www.bioconductor.org/packages//2.13/bioc/vignettes/limma/inst/doc/usersguide.pdf
Citation
shinyLimma is provided free of charge. If you use it, I only ask that you please cite/attribute any work you do with the application to this page, allowing more people to learn of it and use it.
Instructions for a local session:
install.packages("shiny")
shiny::runGitHub("shinyLimma", "SJCaldwell")
This should be enough to launch a shinyLimma session, using R as the back-end and a browser of your choice as the front-end.
To get the full list of packages it will install, see install.R in the src directory.
Instructions for hosting shinyLimma on a server backend.
TBA
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