Echoplot

<img src='https://github.com/RajLabMSSM/echoplot/raw/master/inst/hex/hex.png' title='Hex sticker for echoplot' height='300'><br> <br> <br> <a href='https://app.codecov.io/gh/RajLabMSSM/echoplot/tree/master' target='_blank'><img src='https://codecov.io/gh/RajLabMSSM/echoplot/branch/master/graphs/icicle.svg' title='Codecov icicle graph' width='200' height='50' style='vertical-align: top;'></a>

<h4> Authors: <i>Brian Schilder, Jack Humphrey, Towfique Raj</i> </h4> <h5> README updated: <i>Oct-20-2023</i> </h5>

echoplot: Locus plot creation for fine-mapping and colocalization studies.

This R package is part of the echoverse suite that supports echolocatoR: an automated genomic fine-mapping pipeline.

If you use echoplot, please cite:

Brian M Schilder, Jack Humphrey, Towfique Raj (2021) echolocatoR: an automated end-to-end statistical and functional genomic fine-mapping pipeline, Bioinformatics; btab658, https://doi.org/10.1093/bioinformatics/btab658

Installation

if(!require("BiocManager")) install.packages("BiocManager")

BiocManager::install("RajLabMSSM/echoplot")
library(echoplot)

Documentation

Website

Getting started

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Contact

<a href="https://bschilder.github.io/BMSchilder/" target="_blank">Brian M. Schilder, Bioinformatician II</a>
<a href="https://rajlab.org" target="_blank">Raj Lab</a>
<a href="https://icahn.mssm.edu/about/departments-offices/neuroscience" target="_blank">Department of Neuroscience, Icahn School of Medicine at Mount Sinai</a>