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DTIPrep

DTIPrep performs a "Study-specific Protocol" based automatic pipeline for DWI/DTI quality control and preparation

Install / Use

/learn @NIRALUser/DTIPrep
About this skill

Quality Score

0/100

Supported Platforms

Universal

README

DTIPrep: DWI/DTI Quality Control Tool

What is it?

DTIPrep performs a "Study-specific Protocol" based automatic pipeline for DWI/DTI quality control and preparation. This is both a GUI and command line tool. The configurable pipeline includes image/diffusion information check, padding/Cropping of data, slice-wise, interlace-wise and gradient-wise intensity and motion check, head motion and Eddy current artifact correction, and DTI computing.

Build environment

You can find the necessary environment to build the software in Dockerfile.

Dockerfile for developers

Use below command in source directory to build docker image (Currently having only CentOS7 image).

$ docker build . -t <image-name>
$ docker run --rm -it -v $PWD/../:/work -w /work <image-name> 

Change Log:

v1.3.0-beta (07/10/2020)

  • Superbuild script modified.
  • Dockerfile added

License

See License.txt

More information

Find the tool on NITRC

Related Skills

View on GitHub
GitHub Stars19
CategoryProduct
Updated1y ago
Forks11

Languages

C++

Security Score

80/100

Audited on Jul 15, 2024

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