systems-manager
System-Manager will update your system and install/upgrade applications. Supports Agentic AI through MCP Server
Install / Use
claude mcp add Knuckles-Team -- npx -y github:Knuckles-Team/systems-managerIf the server publishes to npm under a different name, use that package instead — check the repo README.
MCP Server
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View source on GitHubsystems-manager
Version: 2.1.0
systems-manager is the typed host-operations provider for Agent Utilities and
GraphOS. It exposes cross-platform package, service, process, network, disk,
managed-file, firewall, physical-storage, Agent OS, and privacy-safe host-ingestion
capabilities without exposing a raw command tool.
The current package requires Python 3.11–3.14 and
agent-utilities>=2.0.0,<3.0.0.
Install and run
Install only the interface you need:
pip install "systems-manager[mcp]"
systems-manager-mcp --transport stdio
The optional extras are:
| Extra | Capability |
| --- | --- |
| mcp | FastMCP provider runtime |
| agent | Agent server and Logfire integration |
| all | MCP plus agent runtime |
| test | Test dependencies |
For an ephemeral MCP launch:
uvx --from "systems-manager[mcp]" systems-manager-mcp --transport stdio
The checked-in mcp_config.json is a reference-only client catalog. It contains
env:// references and safe deny defaults, never deployment endpoints, credentials,
certificate paths, filesystem paths, hostnames, or identities. Project-specific values
belong in AgentConfig or the process launcher.
Security contract
- Network MCP listeners require configured authentication. Non-loopback listeners also require direct TLS or a trusted TLS-terminating proxy, exact allowed hosts, and the current Agent Utilities transport checks.
- Host mutations are denied unless
SYSTEMS_MANAGER_ALLOW_HOST_MUTATIONS=trueand the individual request receives destructive-operation approval. - Managed-file writes additionally require
SYSTEMS_MANAGER_ALLOW_FILESYSTEM_MUTATIONS=true. - Sensitive reads and active probes have independent default-deny gates.
- Managed paths are confined beneath an explicit
SYSTEMS_MANAGER_FILESYSTEM_ROOT; there is no working-directory fallback. - Raw shell, arbitrary commands, plaintext credentials, model-authored cron creation, and compatibility command aliases are not capabilities.
- Logs and observability are metadata-only. Keep
LANGFUSE_CAPTURE_CONTENT=false.
AgentConfig, secrets, and TLS
Use TLS_PROFILE / TLS_PROFILE_REF with TLS_PROFILES_REF for shared verified
outbound trust. Service-specific profiles such as OIDC_TLS_PROFILE_REF,
MODEL_TLS_PROFILE_REF, and LANGFUSE_TLS_PROFILE_REF may select entries from the
same runtime catalog. Do not hardcode CA paths or verification flags in application
code, and do not disable verification for incomplete certificate chains.
Out-of-band BMC health reads consume one runtime secret projection from
SYSTEMS_MANAGER_BMC_CREDENTIALS. AgentConfig resolves the checked env:// or secret
reference before launch; the provider accepts exactly a JSON object with host, user,
and password. No secret-store vendor, secret path, token, or credential value is
embedded in this package.
The MCP listener's own certificate or trusted-proxy boundary uses the current Agent
Utilities MCP_TLS_* configuration. The optional agent listener uses SERVER_TLS_*
and requires JWT configuration for non-loopback serving.
MCP tools
The default MCP_TOOL_MODE=intent exposes the small intent-verb surface. Backing
action-routed tools stay available for governed discovery and on-demand loading. Tool
and tag filters can further reduce the visible surface.
Auto-generated from the live MCP server; do not edit between the markers.
<!-- MCP-TOOLS-TABLE:START -->Condensed action-routed tools (MCP_TOOL_MODE=condensed)
| MCP Tool | Toggle Env Var | Description |
|----------|----------------|-------------|
| capture_system_snapshot | OS_PROVIDERTOOL | Takes a point-in-time snapshot of the system state (CPU, RAM, Processes). |
| get_management_capabilities | — | |
| get_network_connections | OS_PROVIDERTOOL | Maps active TCP/UDP endpoints directly to owning processes. |
| get_process_details | OS_PROVIDERTOOL | Retrieves deep cross-platform process details (threads, modules, memory). |
| health_check | — | |
| list_kernel_modules | OS_PROVIDERTOOL | List loaded drivers/modules (lsmod or driverquery). |
| list_services | OS_PROVIDERTOOL | Cross-platform service enumeration (systemctl or Get-Service). |
| manage_service | OS_PROVIDERTOOL | Start/Stop/Restart/Enable/Disable services cross-platform. |
| query_system_logs | OS_PROVIDERTOOL | Cross-platform log querying (journalctl or Get-WinEvent). |
| sm_advanced_operations | — | Operations for SSH and specialized managers |
| sm_agent_identity_operations | IDENTITYTOOL | Issues or verifies privacy-preserving agent identities. |
| sm_agent_scheduler_operations | AGENT_HEALTHTOOL | Manages the cognitive scheduler: get stats, list processes, preempt, or reset quota. |
| sm_agent_specialist_operations | SPECIALIST_REGISTRYTOOL | Manages specialist packages: install, uninstall, list, or search. |
| sm_agent_watchdog_operations | WATCHDOGTOOL | Manages file watchdog triggers: check file change, list active watchers, or drain triggers. |
| sm_cron_operations | — | Operations for cron jobs |
| sm_disk_operations | — | Operations for managing system disks |
| sm_file_operations | — | Operations for file and log management |
| sm_firewall_operations | — | Operations for firewall management |
| sm_network_operations | — | Operations for network analysis |
| sm_process_operations | — | Operations for managing system processes |
| sm_service_operations | — | Operations for managing system services |
| sm_storage_health | STORAGE_HEALTHTOOL | Physical disk + BMC drive-fault health: SMART (incl. megaraid passthrough), |
| sm_system_operations | — | System operations for managing packages, system health, and updates |
| sm_user_operations | — | Operations for user and group management |
| start_system_trace | OS_PROVIDERTOOL | Start a kernel-level event trace (ETW on Windows, or strace on Linux). |
| stop_system_trace | OS_PROVIDERTOOL | Stop a kernel-level event trace. |
| systems_ingest_host | — | Ingest a keyed host telemetry projection through the governed ChangeEnvelope boundary as typed HardwareNode, NetworkInterface, and DiskVolume nodes. |
27 action-routed tool(s) · 0 verbose 1:1 tool(s). Each is enabled unless its <DOMAIN>TOOL toggle is set false; MCP_TOOL_MODE selects the surface (intent default — the six verb-tools, granular set loaded on demand · condensed action-routed · verbose 1:1 · both). Auto-generated — do not edit.
Typical backing domains include OS/package lifecycle, services, processes, networks, disks, managed files, cron removal, structured firewall rules, storage/BMC diagnostics, Agent OS administration, and governed host telemetry ingestion. Discover an action schema before calling it; unavailable operations must not be emulated with another tool.
Knowledge-graph ingestion
systems_ingest_host reads local typed telemetry and submits an allowlisted projection
through the Agent Utilities native governed ingestion boundary. It emits only:
HardwareNode,NetworkInterface, andDiskVolumenodes;hasInterfaceandhasVolumerelationships;- HMAC-SHA-256 opaque identifiers derived with the deployment-owned
SYSTEMS_MANAGER_PSEUDONYMIZATION_KEY.
Hostnames, network addresses, hardware addresses, usernames, local paths, credentials, and arbitrary extra fields are rejected or excluded. Missing graph authority, invalid content, and unavailable ingestion fail explicitly; they are not silent no-ops.
GraphOS delegation
Host operations execute inside the service's local operating-system boundary. For fleet work, GraphOS delegates to an authenticated systems-manager service on the target boundary. Inventory, endpoints, credentials, TLS profiles, and target aliases remain external deployment configuration. Persist only opaque, non-personal references.
The bundled systems-manager-operations skill covers every current provider workflow.
Older BMC command and NIC-bond script skills were consolidated because those raw-script
surfaces are not part of the typed current contract.
Agent server
Install the agent extra and launch:
pip install "systems-manager[agent]"
systems-manager-agent --help
Workspace, MCP catalog, and custom-skill paths are accepted only when explicitly configured and present. There is no packaged-config or current-directory fallback. A non-loopback listener requires an explicit allow gate, direct or trusted-proxy TLS, JWT issuer/JWKS/audience configuration, and debug mode disabled.
Environment variables
The generated table is sourced from the value-free .env.example plus the inherited
Agent Utilities contract.
Package environment variables
| Variable | Example | Description |
|----------|---------|-------------|
| SYSTEMS_MANAGER_FILESYSTEM_ROOT | — | Required managed filesystem boundary |
| SYSTEMS_MANAGER_TEMP_ROOT | — | Optional cleanup root beneath the managed boundary |
| SYSTEMS_MANAGER_PSEUDONYMIZATION_KEY | secret-injected | Deployment-owned secret, at least 32 bytes |
| SYSTEMS_MANAGER_BMC_CREDENTIALS | — | Secret-projected JSON with host/user/password |
| TLS_PROFILE | — | Shared mandatory-verification transport profile |
| TLS_PROFILES_REF | — | Runtime reference to the transport profile catalog |
| LANGFUSE_TLS_PROFILE_REF | — | Runtime reference to verified Langfuse trust |
| MCP_TOOL_MODE | intent | Current intent-first tool surface |
| SYSTEMS_MANAGER_ALLOW_HOST_MUTATIONS | false | Default-deny host mutations |
| SYSTEMS_MANAGER_ALLOW_FILESYSTEM_MUTATIONS | false | Default-deny file mutations |
| SYSTEMS_MANAGER_ALLOW_SENSITIVE_READS | false | Default-deny sensitive inventory |
| SYSTEMS_MANAGER_ALLOW_NETWORK_PROBES | false | Default-deny active probes |
| SYSTEMS_MANAGER_MAX_BLOCKING_OPERATIONS | 2 | Bounded host-operation concurrency |
| SYSTEMS_MANAGER_HEALTH_INGEST | true | Enable governed health trend ingestion |
| SYSTEMS_MANAGER_HEALTH_AGGREGATE_S | 3600 | Health trend aggregation window |
| SYSTEMS_MANAGER_NODE_REF | — | Runtime node alias; only a keyed digest persists |
| SYSTEMS_MANAGER_NODE_REFS | — | Runtime aliases for governed derivation |
| SYSTEMS_MANAGER_NOTIFY_URL | — | Optional credential-free HTTPS notification target |
| SYSTEMS_MANAGER_REPOSITORY_ALLOWLIST_JSON | [] | Approved credential-free repositories |
| SYSTEMS_MANAGER_LOCAL_PACKAGE_SHA256_MAP | {} | Approved package paths and digests |
| SYSTEMS_MANAGER_COMMAND_TIMEOUT_SECONDS | 120 | Default command timeout |
| SYSTEMS_MANAGER_ENV_METADATA_ALLOWLIST | — | Non-sensitive environment names readable as metadata |
| SYSTEMS_MANAGER_UV_VERSION | — | Exact approved uv release |
| SYSTEMS_MANAGER_NVM_COMMIT | — | Exact approved NVM commit |
| SYSTEMS_MANAGER_NVM_DIR | — | NVM directory beneath the managed filesystem root |
| ALLOW_UPDATE_ON_K8S | false | Keep Kubernetes lifecycle guard enabled |
| MISCTOOL | true | Register base health/readiness tools |
| OS_PROVIDERTOOL | true | Register operating-system provider tools |
| STORAGE_HEALTHTOOL | true | Register storage health tools |
| AGENT_HEALTHTOOL | true | Register agent health tools |
| IDENTITYTOOL | true | Register identity tools |
| SPECIALIST_REGISTRYTOOL | true | Register specialist registry tools |
| WATCHDOGTOOL | true | Register filesystem watchdog tools |
| MAX_CONCURRENT_AGENTS | 5 | Agent scheduler limit |
| AGENT_POLICIES_PATH | — | Runtime policy location |
| PERMISSIONS_SIGNING_KEY | secret-injected | Runtime secret projection for identity signing |
| SPECIALIST_REGISTRY_PATH | — | Runtime specialist registry location |
| MCP_CONFIG_PATH | — | Runtime MCP catalog location |
| PROJECT_ROOT | — | Runtime automation boundary |
| WORKSPACE_PATH | — | Explicit agent workspace directory
Truncated for display — read the full file on GitHub.
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