Elikopy

ElikoPy is Python library aiming at easing the processing of diffusion imaging for microstructural analysis.

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Install / Use

/learn @Hyedryn/Elikopy

About this skill

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README

ElikoPy

GitHub repo size

ElikoPy is a Python library designed to simplify the processing of diffusion imaging for microstructural analysis.

Installation

Prerequistes

ElikoPy requires Python v3.8+.

Installation Steps

Clone the repository and install the dependencies:

git clone https://github.com/Hyedryn/elikopy.git
cd elikopy
python -m pip install .

If you wish to use movement correction or TBSS, ensure FSL is installed and available in your path.

Note: The DIAMOND microstructural model is not publicly available. If you have it, add the executable to your path. Otherwise, you won't be able to use this algorithm.

Development

Interested in contributing? Wonderful!

Feel free to open issues or pull requests. Your contributions are welcome!

Publications & Citations

If you use ElikoPy in your research, please cite it using the package DOI .

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