Genomin
Genomin is an implementation for large-scale genomic analysis. It is made in Visual Basic 6.0 (VB6). It uses the seek method to generate buffers from large FASTA files (over 8 Gb).
Install / Use
/learn @Gagniuc/GenominREADME
:dna: Genomin
<kbd>Genomin</kbd> is an implementation for large-scale genomic analysis. It is made in <kbd>Visual Basic 6.0 (VB6)</kbd>. It uses the <kbd>seek</kbd> method to generate buffers from large FASTA files (over 8 Gb). The screenshot shows the analysis of a ~ 250 MB FASTA file (representing chromosome 1 from Homo Sapiens). For big FASTA files, goto:
Note: Files compatible with Genomin show the following extensions: <kbd>.fna</kbd> or <kbd>.fa</kbd> or <kbd>.fasta</kbd> or <kbd>.fas</kbd>.
References
- <i>Paul Gagniuc et al. Genomin: a software framework for reading genomic signals. Proc. Rom. Acad., Series B, 13(1):53–62, 2011.</i>
