Attempt
Tools for defensive programming in R
Install / Use
/learn @ColinFay/AttemptREADME
{attempt}

Tools for defensive programming, inspired by {purrr} mappers and based
on {rlang}.
{attempt} is designed to handle the cases when something / someone
attempts to do something it shouldn’t.
For example:
- an attempt to run a
log("a")(error) - an attempt to connect to a web API without an internet connexion (error)
- an attempt to
paste()"good morning"andiris(message/warning) - …
{attempt} provides several condition handlers, from try catch to
simple message printing.
{attempt} only depends on {rlang}, and every function is design to
be fast, making it easy to implement in other functions and packages.
Install
From CRAN:
install.packages("attempt")
The dev version:
install.packages("attempt", repo = "https://colinfay.me/ran")
Reference
library(attempt)
attempt
attempt() is a wrapper around base try() that allows you to insert a
custom messsage on error.
attempt(log("a"))
# Error: non-numeric argument to mathematical function
attempt(log("a"), msg = "Nop !")
# Error: Nop !
You can make it verbose (i.e. returning the expression):
attempt(log("a"), msg = "Nop !", verbose = TRUE)
# Error in log("a"): Nop !
Of course the result is returned if there is one:
attempt(log(1), msg = "Nop !", verbose = TRUE)
# [1] 0
As with try(), the result can be saved as an error object:
a <- attempt(log("a"), msg = "Nop !", verbose = TRUE)
a
# [1] "Error in log(\"a\"): Nop !\n"
# attr(,"class")
# [1] "try-error"
# attr(,"condition")
# <simpleError in log("a"): Nop !>
You can check if the result is an error with is_try_error()
a <- attempt(log("a"), msg = "Nop !", verbose = FALSE)
#> Error: Nop !
is_try_error(a)
#> [1] TRUE
silent_attempt
silent_attempt() is a wrapper around silently() (see further down
for more info) and attempt(). It attempts to run the expr, stays
silent if the expression succeeds, and returns error or warnings if any.
silent_attempt(log("a"))
# Error: non-numeric argument to mathematical function
silent_attempt(log(1))
try catch
You can write a try catch with these params:
exprthe expression to be evaluated.ea mapper or a function evaluated when an error occurs.wa mapper or a function evaluated when a warning occurs.fa mapper or an expression which is always evaluated before returning or exiting
In .e and .f, the .x refers to the error / warning object.
With mappers
try_catch(
expr = log("a"),
.e = ~ paste0("There is an error: ", .x),
.w = ~ paste0("This is a warning: ", .x)
)
# [1] "There is an error: Error in log(\"a\"): non-numeric argument to mathematical function\n"
try_catch(
log("a"),
.e = ~ stop(.x),
.w = ~ warning(.x)
)
# Error in log("a") : non-numeric argument to mathematical function
try_catch(
matrix(1:3, nrow = 2),
.e = ~ print(.x),
.w = ~ print(.x)
)
#<simpleWarning in matrix(1:3, nrow = 2): data length [3] is not a sub-multiple or multiple of the number of rows [2]>
try_catch(
expr = 2 + 2,
.f = ~ print("Using R for addition... ok I'm out!")
)
# [1] "Using R for addition... ok I'm out!"
# [1] 4
As usual, the handlers are set only if you call them:
try_catch(matrix(1:3, nrow = 2), .e = ~ print("error"))
# [,1] [,2]
# [1,] 1 3
# [2,] 2 1
# Warning message:
# In matrix(1:3, nrow = 2) :
# data length [3] is not a sub-multiple or multiple of the number of rows [2]
try_catch(matrix(1:3, nrow = 2), .w = ~ print("warning"))
# [1] "warning"
Traditionnal way
{attempt} is flexible in how you can specify your arguments.
You can, as you do with {base} tryCatch(), use a plain old function:
try_catch(
log("a"),
.e = function(e) {
print(paste0("There is an error: ", e))
print("Ok, let's save this")
time <- Sys.time()
a <- paste("+ At", time, ", \nError:", e)
# write(a, "log.txt", append = TRUE) # commented to prevent log.txt creation
print(paste("log saved on log.txt at", time))
print("let's move on now")
}
)
# [1] "There is an error: Error in log(\"a\"): non-numeric argument to mathematical function\n"
# [1] "Ok, let's save this"
# [1] "log saved on log.txt at 2018-01-30 16:59:13"
# [1] "let's move on now"
You can even mix both:
try_catch(
log("a"),
.e = function(e) {
paste0("There is an error: ", e)
},
.f = ~ print("I'm not sure you can do that pal !")
)
# [1] "I'm not sure you can do that pal !"
# [1] "There is an error: Error in log(\"a\"): non-numeric argument to mathematical function\n"
try_catch(
log("a"),
.e = ~ paste0("There is an error: ", .x),
.f = function() print("I'm not sure you can do that pal !")
)
# [1] "I'm not sure you can do that pal !"
# [1] "There is an error: Error in log(\"a\"): non-numeric argument to mathematical function\n"
try_catch_df()
try_catch_df() returns a tibble with the call, the error message if
any, the warning message if any, and the value of the evaluated
expression or “error”. The values will always be contained in a
list-column.
res_log <- try_catch_df(log("a"))
res_log
#> call error warning value
#> 1 log("a") non-numeric argument to mathematical function NA error
res_log$value
#> [[1]]
#> [1] "error"
res_matrix <- try_catch_df(matrix(1:3, nrow = 2))
res_matrix
#> call error
#> 1 matrix(1:3, nrow = 2) NA
#> warning
#> 1 data length [3] is not a sub-multiple or multiple of the number of rows [2]
#> value
#> 1 1, 2, 3, 1
res_matrix$value
#> [[1]]
#> [,1] [,2]
#> [1,] 1 3
#> [2,] 2 1
res_success <- try_catch_df(log(1))
res_success
#> call error warning value
#> 1 log(1) NA NA 0
res_success$value
#> [[1]]
#> [1] 0
map_try_catch()
map_try_catch() and map_try_catch_df() allow you to map on a list of
arguments l, to be evaluated by the function in fun.
map_try_catch(l = list(1, 3, "a"), fun = log, .e = ~.x)
#> [[1]]
#> [1] 0
#>
#> [[2]]
#> [1] 1.098612
#>
#> [[3]]
#> <simpleError in .Primitive("log")("a"): non-numeric argument to mathematical function>
map_try_catch_df(list(1, 3, "a"), log)
#> call error warning
#> 1 .Primitive("log")(1) <NA> NA
#> 2 .Primitive("log")(3) <NA> NA
#> 3 .Primitive("log")("a") non-numeric argument to mathematical function NA
#> value
#> 1 0
#> 2 1.098612
#> 3 error
Adverbs
Adverbs take a function and return a modified function.
silently()
silently() transforms a function so that when you call this new
function, it returns nothing unless there is an error or a warning
(contrary to attempt that returns the result). In a sense, the new
function stay silent unless error or warning.
silent_log <- silently(log)
silent_log(1)
silent_log("a")
#> Error in .f(...) : non-numeric argument to mathematical function
# Error in .f(...) : non-numeric argument to mathematical function
With silently(), the result is never returned.
silent_matrix <- silently(matrix)
silent_matrix(1:3, 2)
# Warning message:
# In .f(...) :
# data length [3] is not a sub-multiple or multiple of the number of rows [2]
surely()
surely() transforms a function so that when you call this new
function, it calls attempt() - i.e. in the code below, calling
sure_log(1) is the same as calling attempt(log(1)). In a sense,
you’re sure this new function will always work.
sure_log <- surely(log)
sure_log(1)
# [1] 0
sure_log("a")
# Error: non-numeric argument to mathematical function
with_message() and with_warning()
These two functions take a function, and add a warning or a message to it.
as_num_msg <- with_message(as.numeric, msg = "We're performing a numeric conversion")
as_num_warn <- with_warning(as.numeric, msg = "We're performing a numeric conversion")
as_num_msg("1")
#> We're performing a numeric conversion
#> [1] 1
as_num_warn("1")
#> Warning in as_num_warn("1"): We're performing a numeric conversion
#> [1] 1
without_message(), without_warning(), and discretly()
These three functions do the opposite, as they remove warnings and messages:
matrix(1:3, ncol = 2)
no_warning_matrix <- without_warning(matrix)
no_warning_matrix(1:3, ncol = 2)
if_ conditions
if_none(), if_any() and if_all() test the elements of the list.
if_all(1:10, ~ .x < 11, ~ return(letters[1:10]))
#> [1] "a" "b" "c" "d" "e" "f" "g" "h" "i" "j"
if_any(1:10, is.numeric, ~"Yay!")
#> [1] "Yay!"
if_none(1:10, is.character, ~ rnorm(10))
#> [1] 0.5827092 -1.8890270 -0.5411842 -0.4158958 1.1917988 1.0886085
#> [7] 0.8593213 0.5445595 -1.5339712 0.3595704
The defaut for all .p is isTRUE(). So you can:
a <- c(FALSE, TRUE, TRUE, TRUE)
if_any(a, .f = ~"nop!")
#> [1] "nop!"
if_then() performs a simple “if this then do that”:
if_then(1, is.numeric, ~"nop!")
#> [1] "nop!"
if_not() runs .f if .p(.x) is not TRUE :
if_not(.x = 1, .p = is.character, ~".x is not a character")
#> [1] ".x is not a character"
And if_else() is a wrapper around base::ifelse().
If you want th
