EDec

EDec (Epigenomic Deconvolution) is a technique that, starting from methylation and gene expression profiles of bulk tissue samples, infers cell type composition of each input sample as well as DNA methylation and gene transcription profiles of constituent cell types.

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Install / Use

/learn @BRL-BCM/EDec

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README

#Installing EDec in R You can install EDec straght from github. To install it:

1. If you haven't already done so, instal the devtools library.

install.packages("devtools")

2. Install the EDec package.

devtools::install_github("BRL-BCM/EDec")

3. Load the EDec package.

library(EDec)

#EDec user manual The reference manual for the EDec package can be found here.

#EDec example application A example of an application of the EDec package can be found here.

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