compgen2018

teaching material for compgen2018 course http://compgen.mdc-berlin.de

Course modules

• Day1: Bisulfite-seq background, alignment and quality check using Bismark, SeqMonk and FastQC
• Day2: Genomics data integration and visualisation using various Bioconductor packages along with genomation package
• Day3: Methylome segmentation and differential methylation analysis using various Bioconductor packages along with methylKit package