170 skills found · Page 4 of 6
ratan-lab / SumoSubtyping tool for multi-omic data
NIGMS / Integrating Multi Omics DatasetsMulti-omics module that includes RNAseq, Epigenetics, and integrated multi-omics analyses developed as part of the NIGMS Sandbox project
saezlab / MOFAcellulaRR package to infer multicellular programs from single-cell data using multi-omics factor analysis (MOFA)
nf-core / HicarPipeline for HiCAR data, a robust and sensitive multi-omic co-assay for simultaneous measurement of transcriptome, chromatin accessibility and cis-regulatory chromatin contacts.
Xiaoshunxin / MPK GNNGraph Neural Networks with Multiple Prior Knowledge for Multi-Omics Data Analysis
sysbio-curie / PROFILERepository of "Personalization of Logical Models With Multi-Omics Data Allows Clinical Stratification of Patients" paper
netlab-ku / PyPARAGONPAgeRAnk-flux on Graphlet-guided network for multi-Omic data integratioN - Network Inference
samhinshaw / Metabridge Shiny🕸 Network-based multi-omic integration of metabolomics data.
DataX-JieHao / MiNetGene- and Pathway-based Framework for Multi-omics Data Intergration
Yi-Jiang / DRAMSA tool to Detect and Re-Align Mixed-up Samples based on multi-omics data
emdann / MomicsToolsA collection of resources and knowledge for analysis of scATAC+scRNA multi omics data
HelloWorldLTY / CVQVAECodes for paper: CVQVAE: A REPRESENTATION LEARNING METHOD FOR MULTI-OMICS SINGLE CELL DATA INTEGRATION
sjl-sjtu / ScMRDRUnpaired single-cell multi-omics data integration
BoevaLab / Multi Omics Noise ResistanceMore data, more problems? On noise resistance in multi-omics cancer survival models
tianwei-yu / AIMEAutoencoder-based Integrative Multi-omics data Embedding
davidenoma / MokaMOKA Snakemake pipeline for GWAS incorporating user provided multi-omics data sources such as gene expression, neural network weights, transcription factor binding, and evolutionary conservation scores.
lizhen18THU / PRESENTCross-modality representation and multi-sample integration of spatially resolved omics data
GRONINGEN-MICROBIOME-CENTRE / Lifelines NEXTLifelines NEXT is a birth cohort designed to study the effects of intrinsic and extrinsic determinants on health and disease in a four-generation design. It is embedded within the Lifelines cohort study, a prospective three-generation population-based cohort study recording the health and health-related aspects of 167,729 individuals living in Northern Netherlands. In Lifelines NEXT we include 1500 pregnant women intensively follow them, their partners and their children until at least 1 year after birth. This repository describes the codes for the microbiome associated projects within Lifelines NEXT including fecal (microbiome and virome), breastmilk microbiome, vaginal mcirobiome and oral microbiome. Here we also integrate mutpliple multi-omic layers including metabolomics, proteomics and extensive phenotypic data
ijmiller2 / COVID 19 Multi OmicsA repository for collaborative multi-omics data analysis & the covid-omics.app
SysBioChalmers / OrthOmicsCollection of scripts for gene age sorting and multi-omics data mining and analysis
