112 skills found · Page 2 of 4
zebbern / chart-imageGenerate publication-quality PNG chart images from data, supporting line, bar, area, candlestick, pie, and heatmap charts. Triggers when the user asks to visualize data, create a graph, plot a time series, or generate a chart for a report, alert, or dashboard.
NVIDIA / msa-search-nimGenerate multiple sequence alignments (MSAs) for protein sequences using the ColabFold MSA-Search NIM. Use for homolog search, UniRef30/ColabFold env searches, A3M or FASTA alignments, paired MSA search for complexes, PDB70 structural templates, hosted NVIDIA API calls, or local Docker deployment.
NVIDIA / cdf-anomalygenUse when running the CDF AnomalyGen pipeline over a defect dataset — mask placement, fine-tuning, synthetic defect-image generation (SDG), evaluation, quality refinement, and pseudo-labeling — even when the user names only one stage.
NVIDIA / evo2-nimGenerate and analyze DNA sequences using NVIDIA's Evo 2 BioNeMo NIM microservice. Use for Evo2/Evo 2, DNA generation, genomic sequence generation, hosted generation, local Docker deployment, local forward passes, layer outputs, logits, sampled probabilities, and BioNeMo NIM workflows.
NVIDIA / openfold3-nimUse this skill for OpenFold3, NVIDIA's BioNeMo NIM microservice for biomolecular structure prediction. Invoke whenever the user mentions OpenFold3 or needs protein, protein-ligand, protein-DNA/RNA, or multi-chain complex prediction with the hosted NVIDIA API or local Docker NIM.
NVIDIA / amc-setup-calibration-stackLaunch AutoMagicCalib microservice and web UI from NGC release images via Docker Compose
NVIDIA / kermt-continue-pretrainContinue KERMT pretraining on a custom SMILES corpus with a grover_base, cmim, or hybrid checkpoint. Use a local checkpoint or optionally download a pinned Hugging Face model bundle using HF_TOKEN if configured.
NVIDIA / kermt-finetuneFinetune a pretrained KERMT encoder on a labeled CSV. Validate the checkpoint and data, prepare features, and run containerized training. Use a local checkpoint or optionally download a pinned Hugging Face model bundle using HF_TOKEN if configured.
NVIDIA / molmim-nimUse this skill for MolMIM, NVIDIA's BioNeMo NIM microservice for small-molecule latent-space generation and optimization. Invoke for MolMIM, molecular embeddings, hidden states, latent decoding, sampling around a seed SMILES, CMA-ES guided molecule generation, QED or plogP optimization, hosted NVIDI…
NVIDIA / proteinmpnn-nimRun ProteinMPNN inverse folding via NVIDIA NIM to design protein sequences for a target backbone. Sends user-provided PDB files and design parameters to NVIDIA's hosted API, authenticated with an environment API key, or to a user-selected local NIM.
NVIDIA / boltz2-nimUse Boltz2 NIM for biomolecular structure prediction and binding affinity. Invoke for Boltz2, protein structures, protein-ligand/DNA/RNA complexes, SMILES or CCD ligands, pIC50/IC50 affinity scoring, mmCIF output, hosted NVIDIA API calls, or local Docker deployment.
NVIDIA / cuopt-installInstall cuOpt for Python, C, or server via pip, conda, or Docker; verify the install. For building cuOpt from source, see cuopt-developer.
NVIDIA / kermt-embedExtract per-molecule embeddings from any encoder-bearing KERMT checkpoint. Use a local checkpoint or optionally download a pinned Hugging Face model bundle using HF_TOKEN if configured.
NVIDIA / kermt-inferRun predictions with a finetuned KERMT checkpoint on a SMILES-only CSV. The skill validates that the input ckpt has task FFN heads (refuses pretrain ckpts with a redirect to kermt-finetune), validates the CSV, prepares the data (clean + rdkit_2d features), then launches main.py predict inside the ke…
NVIDIA / kermt-monitorCheck progress for a detached KERMT run (pretrain, finetune, or any kermt_run_detached invocation). Reads run.json, queries docker for container state, tails the pretrain/finetune log, and parses progress lines (epoch, step, val loss).
NVIDIA / kermt-setupBootstrap the KERMT agent environment — verify host docker + nvidia-container-toolkit, build the kermt:latest image from the repo's Dockerfile if it doesn't yet exist, and run a GPU smoke test inside the container. Every other kermt-* skill depends on this; invoke it first.
NVIDIA / openfold2-nimUse this skill for OpenFold2, NVIDIA's BioNeMo NIM microservice for monomer protein structure prediction. Invoke whenever the user mentions OpenFold2, AlphaFold2-like monomer folding, protein sequence-to-structure prediction, A3M MSAs, mmCIF templates, hosted NVIDIA API calls, or local Docker deploy…
NVIDIA / rfdiffusion-nimRun RFDiffusion protein backbone design via NVIDIA NIM. Use for de novo protein backbones, motif scaffolding, binder design, hotspot residues, contigs syntax, diffusion steps, hosted NVIDIA API calls, local Docker deployment, and PDB backbone outputs for ProteinMPNN sequence design.
NVIDIA / isaac-cable-insertion-policy-deploymentExport a trained Isaac Lab DisplayPort task-space checkpoint with LEAPP, run it through Isaac ROS Deploy and Isaac Sim 6.0 in separate Docker containers, verify training asset parity, and record insertion video and measured results.
NVIDIA / diffdock-nimRun DiffDock molecular docking via NVIDIA NIM to predict small-molecule binding poses against protein targets. Use for DiffDock, molecular docking, ligand docking, blind docking, SMILES or SDF ligands, ranked poses, confidence scores, hosted NVIDIA API, or local Docker deployment.
NVIDIA / genmol-nimGenerate novel drug-like molecules using the GenMol NIM microservice. Use for de novo generation, scaffold decoration, motif extension, lead optimization, SAFE notation, QED or LogP ranking, hosted NVIDIA API calls, or local Docker deployment.
NVIDIA / kermt-add-cmim-pretrainConvert a grover_base checkpoint (encoder-only or encoder + vocab heads) into a hybrid checkpoint by adding a randomly-initialized cMIM decoder + latent_dist, then continue pretraining on the user's corpus as hybrid (vocab + contrast).
NVIDIA / kermt-pretrain-scratchPretrain a fresh KERMT model from scratch on a user-provided corpus. Builds a new vocabulary from the corpus, instantiates the model architecture from defaults, and launches pretrain_ddp.py inside the kermt container (detached for long runs).
NVIDIA / doca-dtsDeploy and configure the NVIDIA DOCA Telemetry Service (DTS) as it is actually run: (A) BlueField (built-in static pod), (B) Host (docker) on x86_64 / aarch64, or (C) DPF (DPUService / helm chart) — plus the shared configuration layer (`dts_config.ini`, providers, exporters, level labels) that all t…
ljagiello / ctf-forensicsProvides digital forensics and signal analysis techniques for CTF challenges
samber / golang-continuous-integrationGitHub Actions CI/CD pipeline configuration for Golang projects — workflow files for test, lint, SAST, coverage and vulnerability-scan jobs, Dependabot and Renovate config files, GoReleaser release pipelines, Docker build/push, repository security settings, and AI-driven PR review
microsoft / entra-agent-idMicrosoft Entra Agent ID (preview) for creating OAuth2-capable AI agent identities via Microsoft Graph beta API. Covers Agent Identity Blueprints, BlueprintPrincipals, Agent Identities, required permissions, sponsors, and Workload Identity Federation.
microsoft / azure-containerregistry-pyAzure Container Registry SDK for Python. Use for managing container images, artifacts, and repositories. Triggers: "azure-containerregistry", "ContainerRegistryClient", "container images", "docker registry", "ACR".
microsoft / azure-preparePrepare azd-based Azure projects for deployment: generates azure.yaml, infrastructure (Bicep/Terraform), and Dockerfiles for the Azure Developer CLI (azd) workflow. USE ONLY when the user explicitly wants to use azd as the deployment tool, or the project already has an azure.yaml file.
jeremylongshore / anima-deploy-integration'Deploy Anima design-to-code service as a backend API endpoint.
