45 skills found ¡ Page 1 of 2
K-Dense-AI / paper-lookupSearches 18 scholarly APIs for papers, preprints, citations, open-access full text, repository records, and journal OA status, and returns results with reproducible provenance.
K-Dense-AI / ncats-araxQueries the NCATS Translator ARAX production API for bounded, typed, provenance-rich one-hop and endpoint-pinned two-hop biomedical knowledge-graph relationships.
SnailSploit / offensive-bluetooth-bleBluetooth Low Energy (BLE) attack methodology â GATT enumeration, characteristic read/write without auth, pairing downgrade (Just Works forced), LE Secure Connections bypass, MITM via active relay, sniffing with Sniffle (TI CC1352) / Ubertooth / Frontline, encryption key extraction (LE Legacy PairinâĻ
SnailSploit / offensive-bluetooth-classicBluetooth Classic (BR/EDR) attack methodology â device discovery, service enumeration via SDP, LMP/L2CAP layer attacks, legacy PIN cracking (BlueBorne / KNOB), Bluetooth file-transfer abuse (BlueSnarfing legacy), unauthenticated profile abuse (HSP, HFP, OPP), and modern relevance against older indusâĻ
brycewang-stanford / review-papRun a 6-agent pre-submission review of a pre-analysis plan (PAP) for a specified registration target or journal
brycewang-stanford / lifelinesComplete survival analysis library in Python. Handles right-censored data, Kaplan-Meier curves, and Cox regression. Standard for clinical trial analysis and epidemiology.
NVIDIA / digital-health-clinical-asr-evalStage 3 of Clinical ASR Flywheel. Score a NeMo manifest, produce the five-section KER leaderboard (by-ipa_source diagnostic). Not for ASR auth (/riva-asr).
NVIDIA / digital-health-clinical-asr-buildStage 2 of the Clinical ASR Flywheel
NVIDIA / digital-health-clinical-asr-finetuneStage 4 of the Clinical ASR Flywheel
NVIDIA / digital-health-clinical-asr-setupStage 1 of Clinical ASR Flywheel
google-deepmind / alphagenome-single-variant-analysisAnalyzes genetic variant effects on gene expression (RNA-seq), chromatin accessibility (DNASE), histone marks (ChIP), and transcription factors using the AlphaGenome API
google-deepmind / embl-ebi-olsQuery and search the EMBL-EBI Ontology Lookup Service (OLS) for biomedical ontology terms, definitions, and hierarchies across 250+ ontologies (e.g., GO, DOID, HP)
FreedomIntelligence / bio-bedgraph-handlingbedGraph is a text format for displaying continuous-valued data on genome browsers. Common for coverage, signal intensity, and scores.
FreedomIntelligence / bio-data-visualization-specialized-omics-plotsThis skill provides reusable plotting functions for common omics visualizations that can be applied across different analysis types: - Volcano plots (any DE result) - MA plots (any log-fold-change data) - PCA plots (any high-dimensional data) - Enrichment dotplots (manual, not enrichplot) - ExpressiâĻ
FreedomIntelligence / bio-alignment-indexingCreate indices for random access to alignment files using samtools and pysam.
FreedomIntelligence / bio-alignment-sortingSort alignment files by coordinate or read name using samtools and pysam.
FreedomIntelligence / bio-alignment-validationPost-alignment quality control to verify alignment quality and identify issues.
FreedomIntelligence / bio-codon-usageAnalyze codon usage patterns and calculate codon adaptation metrics using Biopython.
FreedomIntelligence / bio-copy-number-cnv-annotationAnnotate CNVs with genes, pathways, and clinical significance
FreedomIntelligence / bio-data-visualization-circos-plotsCircular genome visualizations for displaying multiple data tracks around chromosome ideograms.
FreedomIntelligence / bio-genome-assembly-assembly-qcEvaluate genome assembly quality with contiguity metrics (QUAST) and gene completeness (BUSCO).
FreedomIntelligence / bio-genome-intervals-bed-file-basicsBED (Browser Extensible Data) format stores genomic intervals. Uses 0-based, half-open coordinates.
FreedomIntelligence / bio-genome-intervals-bigwig-tracksBigWig is an indexed binary format for continuous genomic data. Efficient for genome browsers and programmatic access.
FreedomIntelligence / bio-genome-intervals-coverage-analysisCalculate coverage and depth across genomic regions using bedtools and pybedtools.
FreedomIntelligence / bio-genome-intervals-gtf-gff-handlingGTF and GFF3 are standard gene annotation formats. Both use 1-based coordinates.
FreedomIntelligence / bio-genome-intervals-interval-arithmeticCore set operations on genomic intervals using bedtools (CLI) and pybedtools (Python).
FreedomIntelligence / bio-genome-intervals-proximity-operationsOperations for finding nearby features and extending intervals using bedtools and pybedtools.
FreedomIntelligence / bio-geo-dataQuery and access Gene Expression Omnibus datasets using Biopython's Entrez module.
FreedomIntelligence / armored-cart-design-agentThe Armored CAR-T Design Agent provides AI-assisted design of next-generation armored CAR-T cells engineered to express cytokines, chemokines, or other enhancing factors.
FreedomIntelligence / bio-experimental-design-power-analysisPower = probability of detecting a true effect. Underpowered studies waste resources; overpowered studies are inefficient.
