288 skills found · Page 4 of 10
FreedomIntelligence / bio-blast-searchesRun BLAST searches against NCBI databases using Biopython's Bio.Blast module.
FreedomIntelligence / bio-clinical-databases-clinvar-lookupQuery ClinVar for variant pathogenicity classifications, review status, and disease associations via REST API or local VCF
FreedomIntelligence / bio-clinical-databases-gnomad-frequenciesQuery gnomAD for population allele frequencies to assess variant rarity
FreedomIntelligence / bio-clinical-databases-hla-typingCall HLA alleles from NGS data using OptiType, HLA-HD, or arcasHLA for immunogenomics applications
FreedomIntelligence / bio-clinical-databases-myvariant-queriesQuery myvariant.info API for aggregated variant annotations from multiple databases (ClinVar, gnomAD, dbSNP, COSMIC, etc.) in a single request
FreedomIntelligence / bio-clinical-databases-pharmacogenomicsQuery PharmGKB and CPIC for drug-gene interactions, pharmacogenomic annotations, and dosing guidelines
FreedomIntelligence / bio-clinical-databases-polygenic-riskCalculate polygenic risk scores using PRSice-2, LDpred2, or PRS-CS from GWAS summary statistics
FreedomIntelligence / bio-clinical-databases-tumor-mutational-burdenCalculate tumor mutational burden from panel or WES data with proper normalization and clinical thresholds
FreedomIntelligence / bio-clinical-databases-variant-prioritizationFilter and prioritize variants by pathogenicity, population frequency, and clinical evidence for rare disease analysis
FreedomIntelligence / bio-entrez-fetchRetrieve records from NCBI databases using Biopython's Entrez module (EFetch, ESummary utilities).
FreedomIntelligence / bio-entrez-linkNavigate between NCBI databases using Biopython's Entrez module (ELink utility).
FreedomIntelligence / bio-entrez-searchSearch NCBI databases using Biopython's Entrez module (ESearch, EInfo, EGQuery utilities).
FreedomIntelligence / bio-clinical-databases-dbsnp-queriesQuery dbSNP for rsID lookups, variant annotations, and cross-references to other databases
jeremylongshore / agency-osNotion-as-source-of-truth dispatch board for running your work like an AI agency. One Tasks database is the source of truth; tasks flow Suggestion through Discussion, To-Do, In Progress, and Done with subtasks, recurring cadences, dependencies, and template subtrees.
jeremylongshore / algolia-webhooks-eventsImplement and validate Algolia click, conversion, and view events while separating them from source-to-index synchronization
elementalsouls / cloud-saas-exposureOrganization-grade cloud and supply-chain attack-surface discovery: S3/GCS/Azure Blob bucket discovery via observed-name mining (CNAME/cert-SAN/Wayback) and bounded two-class permutation (6 prefixes x 15 suffixes on trusted tokens, bounded target-bound expansion on subdomain stems), existence (HEAD/…
softaworks / database-schema-designerDesign robust, scalable database schemas for SQL and NoSQL databases. Provides normalization guidelines, indexing strategies, migration patterns, constraint design, and performance optimization. Ensures data integrity, query performance, and maintainable data models.
softaworks / mermaid-diagramsComprehensive guide for creating software diagrams using Mermaid syntax
softaworks / naming-analyzerSuggest better variable, function, and class names based on context and conventions.
mrgoonie / Root Cause TracingSystematically trace bugs backward through call stack to find original trigger
P4nda0s / rev-idapythonIDAPython and IDALib script reference for reverse engineering. Activate when the user needs to write IDAPython scripts in IDA, use IDALib for headless analysis, operate on IDB databases, debug with IDA, manipulate memory/registers, traverse functions/blocks/instructions, work with Hex-Rays decompile…
LeoYeAI / academic-research-hubUse this skill when users need to search academic papers, download research documents, extract citations, or gather scholarly information.
LeoYeAI / Agent Memory ArchitectureComplete zero-dependency memory system for AI agents — file-based architecture, daily notes, long-term curation, context management, heartbeat integration, and memory hygiene. No APIs, no databases, no external tools. Works with any agent framework.
LeoYeAI / afrexai-startup-metrics-engineComplete startup metrics command center — from raw data to investor-ready dashboards. Covers every stage (pre-seed to Series B+), every model (SaaS, marketplace, consumer, hardware), with diagnostic frameworks, benchmark databases, and board-ready reporting.
LeoYeAI / apiclaw-analysisFinds winning Amazon products with 14 battle-tested selection strategies & 6-dimension risk assessment. Backed by 200M+ product database
Syngnat / GoNaviHigh-performance multi-data-source database client — ~30MB, AI & MCP ready, zero Electron bloat. | 高性能多数据源数据库客户端：约 30MB，AI 与 MCP 就绪，告别 Electron 膨胀。
aipoch / biodbnet-apiAccess bioDBnet REST services for biological identifier conversion, pathway retrieval, and ortholog mapping
aipoch / postdoc-fellowship-matcherFilter and match postdoctoral fellowship opportunities based on applicant nationality, years since PhD, and research field from a curated database.
aipoch / uspto-databaseAccess USPTO data (Patent Search, PEDS, TSDR, assignments) when you need to query patents/trademarks and retrieve prosecution or status information programmatically.
timescale / postgres-database-migrationUse this skill for planning, testing, and safely executing PostgreSQL schema migrations — especially when working with production data or shared databases.
